STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PRN4_SCHCMUncharacterized protein. (360 aa)    
Predicted Functional Partners:
D8QFQ3_SCHCM
Eukaryotic translation initiation factor 5A.
   
 0.996
MFBC
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
   
 0.892
D8PSV9_SCHCM
Brix domain-containing protein.
 
 
    0.677
D8PSH2_SCHCM
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.673
D8QAT0_SCHCM
Uncharacterized protein.
    
 
 0.608
D8Q0R6_SCHCM
Argininosuccinate synthetase.
      
 0.549
D8Q771_SCHCM
Tyrosine--tRNA ligase.
  
  
 0.510
D8PV15_SCHCM
Arginase; Belongs to the arginase family.
     
 0.496
D8PPG6_SCHCM
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.489
D8Q6G0_SCHCM
CFEM domain-containing protein.
   
  
 0.489
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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