STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PRP7_SCHCMUncharacterized protein. (320 aa)    
Predicted Functional Partners:
D8PPT9_SCHCM
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.566
D8PXW8_SCHCM
WD_REPEATS_REGION domain-containing protein.
     
 0.514
D8PML3_SCHCM
PCI domain-containing protein.
    
  0.469
D8QEQ0_SCHCM
Uncharacterized protein.
    
  0.459
D8PQ35_SCHCM
WD_REPEATS_REGION domain-containing protein.
     
 0.450
D8PRQ6_SCHCM
MPN domain-containing protein.
    
  0.444
D8PQ30_SCHCM
PCI domain-containing protein.
    
  0.432
D8QEN9_SCHCM
MPN domain-containing protein.
    
  0.431
D8Q6A6_SCHCM
PCI domain-containing protein.
    
  0.426
D8PT63_SCHCM
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
     
 0.403
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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