STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PTN8_SCHCMUncharacterized protein. (113 aa)    
Predicted Functional Partners:
D8QKZ3_SCHCM
Uncharacterized protein.
   
   0.525
D8PQC1_SCHCM
Ribosomal_L2_C domain-containing protein.
   
 
 0.496
D8PQN7_SCHCM
Ribosomal protein L13A; Belongs to the universal ribosomal protein uL13 family.
   
   0.467
D8PLK4_SCHCM
Ribosomal_L2_C domain-containing protein.
   
 
 0.454
D8Q8E3_SCHCM
Uncharacterized protein.
   
   0.451
D8Q9D8_SCHCM
Uncharacterized protein.
   
   0.447
ubi::crp-6
Uncharacterized protein ubi::crp-6.
    
  0.414
D8PP33_SCHCM
MPN domain-containing protein.
    
 0.412
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.