D8PWM8_SCHCM protein (Schizophyllum commune)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D8PWM8_SCHCM

Uncharacterized protein. (556 aa)

Predicted Functional Partners:

D8PK24_SCHCM

0.999

D8PVP7_SCHCM

0.999

D8PZN6_SCHCM

0.999

D8Q444_SCHCM

0.999

D8QAR0_SCHCM

0.999

D8QBX9_SCHCM

0.999

D8QLJ0_SCHCM

0.999

D8PPX4_SCHCM

0.927

D8PPA5_SCHCM

0.892

D8Q5Q2_SCHCM

0.886

Your Current Organism:

Schizophyllum commune

NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8PK24_SCHCM	D8PPA5_SCHCM	D8PK24	D8PPA5	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.587
D8PK24_SCHCM	D8PPX4_SCHCM	D8PK24	D8PPX4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Phosducin domain-containing protein.	0.900
D8PK24_SCHCM	D8PVP7_SCHCM	D8PK24	D8PVP7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit delta.	0.999
D8PK24_SCHCM	D8PWM8_SCHCM	D8PK24	D8PWM8	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
D8PK24_SCHCM	D8PZN6_SCHCM	D8PK24	D8PZN6	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.999
D8PK24_SCHCM	D8Q444_SCHCM	D8PK24	D8Q444	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
D8PK24_SCHCM	D8Q5Q2_SCHCM	D8PK24	D8Q5Q2	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.871
D8PK24_SCHCM	D8QAR0_SCHCM	D8PK24	D8QAR0	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
D8PK24_SCHCM	D8QBX9_SCHCM	D8PK24	D8QBX9	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
D8PK24_SCHCM	D8QLJ0_SCHCM	D8PK24	D8QLJ0	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
D8PPA5_SCHCM	D8PK24_SCHCM	D8PPA5	D8PK24	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.587
D8PPA5_SCHCM	D8PVP7_SCHCM	D8PPA5	D8PVP7	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.789
D8PPA5_SCHCM	D8PWM8_SCHCM	D8PPA5	D8PWM8	Uncharacterized protein.	Uncharacterized protein.	0.892
D8PPA5_SCHCM	D8PZN6_SCHCM	D8PPA5	D8PZN6	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.531
D8PPA5_SCHCM	D8Q444_SCHCM	D8PPA5	D8Q444	Uncharacterized protein.	Uncharacterized protein.	0.699
D8PPA5_SCHCM	D8QAR0_SCHCM	D8PPA5	D8QAR0	Uncharacterized protein.	Uncharacterized protein.	0.710
D8PPA5_SCHCM	D8QBX9_SCHCM	D8PPA5	D8QBX9	Uncharacterized protein.	Uncharacterized protein.	0.668
D8PPA5_SCHCM	D8QLJ0_SCHCM	D8PPA5	D8QLJ0	Uncharacterized protein.	Uncharacterized protein.	0.716
D8PPX4_SCHCM	D8PK24_SCHCM	D8PPX4	D8PK24	Phosducin domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.900
D8PPX4_SCHCM	D8PVP7_SCHCM	D8PPX4	D8PVP7	Phosducin domain-containing protein.	T-complex protein 1 subunit delta.	0.914