STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PZN9_SCHCMERCC4 domain-containing protein. (717 aa)    
Predicted Functional Partners:
D8QC41_SCHCM
Uncharacterized protein.
   
 0.935
D8PN94_SCHCM
XPA_C domain-containing protein.
    
 0.893
D8PZN8_SCHCM
Uncharacterized protein.
    
 0.881
D8PNU4_SCHCM
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.876
D8QIK1_SCHCM
Expressed protein.
    
 0.869
D8QA32_SCHCM
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.866
D8PZX0_SCHCM
ERCC4 domain-containing protein.
    
 0.855
D8Q3K1_SCHCM
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.823
D8QIK5_SCHCM
Uncharacterized protein.
   
 0.817
D8QED5_SCHCM
Rad52-like protein.
    
 0.783
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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