STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8Q493_SCHCMWD_REPEATS_REGION domain-containing protein. (414 aa)    
Predicted Functional Partners:
D8QE07_SCHCM
Ribosomal_L16 domain-containing protein.
    
 
 0.994
D8PS97_SCHCM
Glutamate-rich WD repeat-containing protein.
   
  
 0.882
D8QA01_SCHCM
Fes1 domain-containing protein.
    
 
 0.722
D8QDB9_SCHCM
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.722
D8QH08_SCHCM
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.627
D8PQY4_SCHCM
WD_REPEATS_REGION domain-containing protein.
  
   
0.625
D8QD62_SCHCM
Uncharacterized protein.
     
 0.613
D8PXJ3_SCHCM
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.602
D8QAH4_SCHCM
ANK_REP_REGION domain-containing protein.
   
  
 0.600
D8PR76_SCHCM
Uncharacterized protein.
   
  
 0.587
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.