STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8Q558_SCHCMPHD domain-containing protein. (976 aa)    
Predicted Functional Partners:
D8PXM4_SCHCM
TAF domain-containing protein.
    
 0.999
D8Q3C8_SCHCM
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.996
D8PSA0_SCHCM
TAF1, transcription initiation factor TFIID, subunit TAF1.
    
 0.994
D8PML2_SCHCM
Uncharacterized protein.
    
 0.991
D8PP44_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
 0.990
D8PT22_SCHCM
Uncharacterized protein.
    
 0.990
D8PUY0_SCHCM
TFIID_20kDa domain-containing protein.
    
 0.990
D8Q789_SCHCM
TAFII28 domain-containing protein.
   
 0.990
D8PMX6_SCHCM
TAF4 domain-containing protein.
    
 0.989
D8PVN6_SCHCM
TAFII55_N domain-containing protein.
    
 0.987
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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