Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8PLI0_SCHCM | D8PQ37_SCHCM | D8PLI0 | D8PQ37 | Uncharacterized protein. | RRM domain-containing protein. | 0.984 |
D8PLI0_SCHCM | D8PRT3_SCHCM | D8PLI0 | D8PRT3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.930 |
D8PLI0_SCHCM | D8PTA9_SCHCM | D8PLI0 | D8PTA9 | Uncharacterized protein. | TRASH domain-containing protein. | 0.928 |
D8PLI0_SCHCM | D8PV05_SCHCM | D8PLI0 | D8PV05 | Uncharacterized protein. | Brix domain-containing protein. | 0.968 |
D8PLI0_SCHCM | D8PW85_SCHCM | D8PLI0 | D8PW85 | Uncharacterized protein. | Uncharacterized protein. | 0.970 |
D8PLI0_SCHCM | D8PXJ3_SCHCM | D8PLI0 | D8PXJ3 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.983 |
D8PLI0_SCHCM | D8Q5W3_SCHCM | D8PLI0 | D8Q5W3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.569 |
D8PLI0_SCHCM | D8QB32_SCHCM | D8PLI0 | D8QB32 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.987 |
D8PLI0_SCHCM | D8QC95_SCHCM | D8PLI0 | D8QC95 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
D8PQ37_SCHCM | D8PLI0_SCHCM | D8PQ37 | D8PLI0 | RRM domain-containing protein. | Uncharacterized protein. | 0.984 |
D8PQ37_SCHCM | D8PRT3_SCHCM | D8PQ37 | D8PRT3 | RRM domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.894 |
D8PQ37_SCHCM | D8PTA9_SCHCM | D8PQ37 | D8PTA9 | RRM domain-containing protein. | TRASH domain-containing protein. | 0.994 |
D8PQ37_SCHCM | D8PV05_SCHCM | D8PQ37 | D8PV05 | RRM domain-containing protein. | Brix domain-containing protein. | 0.997 |
D8PQ37_SCHCM | D8PW85_SCHCM | D8PQ37 | D8PW85 | RRM domain-containing protein. | Uncharacterized protein. | 0.959 |
D8PQ37_SCHCM | D8PXJ3_SCHCM | D8PQ37 | D8PXJ3 | RRM domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.994 |
D8PQ37_SCHCM | D8Q5W3_SCHCM | D8PQ37 | D8Q5W3 | RRM domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.579 |
D8PQ37_SCHCM | D8Q6U5_SCHCM | D8PQ37 | D8Q6U5 | RRM domain-containing protein. | CP-type G domain-containing protein. | 0.984 |
D8PQ37_SCHCM | D8QB32_SCHCM | D8PQ37 | D8QB32 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
D8PQ37_SCHCM | D8QC95_SCHCM | D8PQ37 | D8QC95 | RRM domain-containing protein. | Uncharacterized protein. | 0.995 |
D8PRT3_SCHCM | D8PLI0_SCHCM | D8PRT3 | D8PLI0 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.930 |
page 1 of 6