STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8Q5W3_SCHCMWD_REPEATS_REGION domain-containing protein. (387 aa)    
Predicted Functional Partners:
D8QC95_SCHCM
Uncharacterized protein.
   
 
 0.639
D8QB32_SCHCM
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.633
D8PXJ3_SCHCM
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.624
D8PV05_SCHCM
Brix domain-containing protein.
   
 
 0.618
D8PRT3_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
 
 0.607
D8PW85_SCHCM
Uncharacterized protein.
   
 
 0.605
D8PTA9_SCHCM
TRASH domain-containing protein.
   
 
 0.602
D8PQ37_SCHCM
RRM domain-containing protein.
   
 
 0.579
D8PLI0_SCHCM
Uncharacterized protein.
   
 
 0.569
D8Q6U5_SCHCM
CP-type G domain-containing protein.
   
 
 0.569
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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