STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8Q7M2_SCHCMUncharacterized protein. (171 aa)    
Predicted Functional Partners:
D8PLK8_SCHCM
WD_REPEATS_REGION domain-containing protein.
    
 0.998
D8QI82_SCHCM
B30.2/SPRY domain-containing protein.
    
 0.998
D8QJ45_SCHCM
Uncharacterized protein.
   
 
 0.986
D8Q420_SCHCM
Uncharacterized protein.
   
 
 0.971
D8PRE8_SCHCM
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.950
ubi::crp-6
Uncharacterized protein ubi::crp-6.
    
  0.890
D8QBY6_SCHCM
Uncharacterized protein.
    
 0.869
D8Q0T1_SCHCM
F-box domain-containing protein.
    
 0.866
D8PV61_SCHCM
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
      0.825
D8PNL6_SCHCM
Histone H3; Belongs to the histone H3 family.
    
 0.822
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.