D8QAG7_SCHCM protein (Schizophyllum commune)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D8QAG7_SCHCM

Metallophos domain-containing protein. (640 aa)

Predicted Functional Partners:

D8Q145_SCHCM

0.708

D8Q4P9_SCHCM

0.637

D8QFM9_SCHCM

0.588

D8QLE1_SCHCM

0.543

D8QJD1_SCHCM

0.534

D8PK20_SCHCM

0.526

D8Q9K3_SCHCM

0.510

D8Q0P3_SCHCM

0.509

D8QAL9_SCHCM

0.488

D8PSV2_SCHCM

0.439

Your Current Organism:

Schizophyllum commune

NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8PK20_SCHCM	D8PSV2_SCHCM	D8PK20	D8PSV2	PNP_UDP_1 domain-containing protein.	A_deaminase domain-containing protein.	0.964
D8PK20_SCHCM	D8Q0P3_SCHCM	D8PK20	D8Q0P3	PNP_UDP_1 domain-containing protein.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.454
D8PK20_SCHCM	D8Q9K3_SCHCM	D8PK20	D8Q9K3	PNP_UDP_1 domain-containing protein.	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	0.490
D8PK20_SCHCM	D8QAG7_SCHCM	D8PK20	D8QAG7	PNP_UDP_1 domain-containing protein.	Metallophos domain-containing protein.	0.526
D8PK20_SCHCM	D8QFM9_SCHCM	D8PK20	D8QFM9	PNP_UDP_1 domain-containing protein.	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	0.797
D8PK20_SCHCM	D8QJD1_SCHCM	D8PK20	D8QJD1	PNP_UDP_1 domain-containing protein.	PNP_UDP_1 domain-containing protein.	0.978
D8PSV2_SCHCM	D8PK20_SCHCM	D8PSV2	D8PK20	A_deaminase domain-containing protein.	PNP_UDP_1 domain-containing protein.	0.964
D8PSV2_SCHCM	D8Q9K3_SCHCM	D8PSV2	D8Q9K3	A_deaminase domain-containing protein.	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	0.598
D8PSV2_SCHCM	D8QAG7_SCHCM	D8PSV2	D8QAG7	A_deaminase domain-containing protein.	Metallophos domain-containing protein.	0.439
D8PSV2_SCHCM	D8QFM9_SCHCM	D8PSV2	D8QFM9	A_deaminase domain-containing protein.	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	0.615
D8PSV2_SCHCM	D8QJD1_SCHCM	D8PSV2	D8QJD1	A_deaminase domain-containing protein.	PNP_UDP_1 domain-containing protein.	0.541
D8Q0P3_SCHCM	D8PK20_SCHCM	D8Q0P3	D8PK20	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	PNP_UDP_1 domain-containing protein.	0.454
D8Q0P3_SCHCM	D8QAG7_SCHCM	D8Q0P3	D8QAG7	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	Metallophos domain-containing protein.	0.509
D8Q0P3_SCHCM	D8QAL9_SCHCM	D8Q0P3	D8QAL9	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	Nudix hydrolase domain-containing protein.	0.874
D8Q0P3_SCHCM	D8QLE1_SCHCM	D8Q0P3	D8QLE1	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	Nudix hydrolase domain-containing protein.	0.971
D8Q145_SCHCM	D8QAG7_SCHCM	D8Q145	D8QAG7	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	Metallophos domain-containing protein.	0.708
D8Q4P9_SCHCM	D8QAG7_SCHCM	D8Q4P9	D8QAG7	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Metallophos domain-containing protein.	0.637
D8Q9K3_SCHCM	D8PK20_SCHCM	D8Q9K3	D8PK20	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	PNP_UDP_1 domain-containing protein.	0.490
D8Q9K3_SCHCM	D8PSV2_SCHCM	D8Q9K3	D8PSV2	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	A_deaminase domain-containing protein.	0.598
D8Q9K3_SCHCM	D8QAG7_SCHCM	D8Q9K3	D8QAG7	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	Metallophos domain-containing protein.	0.510