STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QC81_SCHCMTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (199 aa)    
Predicted Functional Partners:
D8PKI9_SCHCM
Uncharacterized protein.
   
 0.999
D8PP28_SCHCM
Uncharacterized protein.
   
 0.999
D8PPM8_SCHCM
Uncharacterized protein.
    
 0.999
D8PV75_SCHCM
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
D8PVM2_SCHCM
Trafficking protein particle complex subunit BET3.
   
 0.999
D8QKI9_SCHCM
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
 0.999
D8PWU5_SCHCM
Uncharacterized protein.
    
 0.998
D8QA22_SCHCM
Uncharacterized protein.
    
 0.994
D8Q1H9_SCHCM
TPR_REGION domain-containing protein.
    
 0.983
D8PW17_SCHCM
Uncharacterized protein.
    
 0.982
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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