STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QCT5_SCHCMUncharacterized protein. (1059 aa)    
Predicted Functional Partners:
D8PNU4_SCHCM
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.985
D8Q4G2_SCHCM
Uncharacterized protein.
   
 
 0.934
D8PTF4_SCHCM
Uncharacterized protein.
  
  
 
0.911
DCM1
RecA family ATPase; Belongs to the RecA family.
  
 
 0.841
D8QED5_SCHCM
Rad52-like protein.
    
 
 0.838
D8QEA9_SCHCM
Uncharacterized protein.
  
 
 0.784
D8Q3K1_SCHCM
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 
 0.735
D8QM18_SCHCM
Uncharacterized protein.
   
 
 0.725
D8PZX0_SCHCM
ERCC4 domain-containing protein.
   
 0.659
D8Q0I4_SCHCM
DNA ligase.
   
 0.656
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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