STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QDI3_SCHCMNUC153 domain-containing protein. (746 aa)    
Predicted Functional Partners:
D8PZM2_SCHCM
Bms1-type G domain-containing protein.
   
 
 0.999
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
D8PLI5_SCHCM
Uncharacterized protein.
   
 
 0.998
D8PLW6_SCHCM
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.998
D8PSR4_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
D8PTD8_SCHCM
Uncharacterized protein.
   
 
 0.998
D8Q3H3_SCHCM
Uncharacterized protein.
   
 
 0.998
D8QE14_SCHCM
CBF domain-containing protein.
   
 
 0.998
D8QHD0_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
D8QKX0_SCHCM
U3 small nucleolar RNA-associated protein 22.
   
 
 0.998
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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