STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QDP6_SCHCMUSP domain-containing protein; Belongs to the peptidase C19 family. (1135 aa)    
Predicted Functional Partners:
ubi::crp-6
Uncharacterized protein ubi::crp-6.
    
  0.641
D8PLG1_SCHCM
Ubiquitin carboxyl-terminal hydrolase.
      
 0.601
ubi4
Uncharacterized protein ubi4.
    
  0.499
D8PVH3_SCHCM
OTU domain-containing protein.
      
 0.499
ubi
Polyubiquitin.
    
  0.499
D8Q689_SCHCM
MPN domain-containing protein.
      
 0.471
D8PSP9_SCHCM
C2H2-type domain-containing protein.
   
  
 0.459
D8QG26_SCHCM
USP domain-containing protein; Belongs to the peptidase C19 family.
      
 0.456
D8Q7J7_SCHCM
RING-type domain-containing protein.
   
  
 0.451
D8QC41_SCHCM
Uncharacterized protein.
    
 0.436
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.