STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QKI5_SCHCMUncharacterized protein. (1361 aa)    
Predicted Functional Partners:
D8QHR7_SCHCM
Uncharacterized protein.
   
 0.970
D8QGA6_SCHCM
Uncharacterized protein.
   
 0.969
D8PKH2_SCHCM
Uncharacterized protein; Belongs to the actin family.
    
 0.965
D8PRE0_SCHCM
Uncharacterized protein.
   
0.962
D8PKK9_SCHCM
ARID domain-containing protein.
   
 
 0.944
D8PRA1_SCHCM
RFX-type winged-helix domain-containing protein.
    
 
 0.925
D8Q1V5_SCHCM
Uncharacterized protein.
   
 0.903
D8Q843_SCHCM
Uncharacterized protein.
   
 
 0.816
D8Q7K6_SCHCM
Bromo domain-containing protein.
    
 
 0.777
D8PRE8_SCHCM
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.740
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.