STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N8PZ95Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
A0A194S2Y0
Aminotran_1_2 domain-containing protein.
     
 0.956
A0A194S4L0
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.951
A0A0P9ENZ0
Uncharacterized protein.
     
 0.949
A0A0P9IT13
Aminotran_1_2 domain-containing protein.
     
 0.947
A0A194SBX5
Uncharacterized protein.
    
 0.945
A0A0P9EP18
Mannosyltransferase.
   
 
 0.944
A0A0P9EIP5
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.928
A0A194S5D5
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
    
 0.927
A0A194SEB2
acidPPc domain-containing protein.
    
 0.925
A0A0P9EK73
TLC domain-containing protein.
     
 0.921
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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