STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N8PZM7RING-type domain-containing protein. (856 aa)    
Predicted Functional Partners:
A0A194S5B1
Uncharacterized protein.
   
 
 0.685
A0A194S8R4
Uncharacterized protein.
    
 
 0.639
A0A0P9EJ12
40S ribosomal protein S20.
    
 
 0.636
A0A194SB44
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.626
A0A194S2G1
Uncharacterized protein.
   
 
 0.615
A0A194S967
GYF domain-containing protein.
    
 
 0.613
A0A194S6F8
Uncharacterized protein.
    
 
 0.608
A0A0N8PZ87
Guanine nucleotide binding protein beta subunit.
    
 
 0.607
A0A194S104
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.551
A0A194SCK0
TOG domain-containing protein.
    
 
 0.542
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.