STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N8Q036SWIM-type domain-containing protein. (536 aa)    
Predicted Functional Partners:
A0A194S764
Ku domain-containing protein.
   
 0.932
A0A0P9GG17
SAP domain-containing protein.
   
 0.927
A0A194S3M6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.914
A0A0P9GKM4
Uncharacterized protein.
  
 
 0.757
A0A194S940
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 
 0.757
A0A0P9EIN8
AAA_23 domain-containing protein.
   
 0.755
A0A194S3B4
3'-5' exonuclease domain-containing protein.
    
 0.751
A0A194S413
Serine/threonine-protein kinase TOR.
    
 0.751
A0A0P9GFA5
Uncharacterized protein.
   
 0.744
A0A194SAF6
DRMBL domain-containing protein.
   
 0.744
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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