STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9EJW8Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
A0A194SBS3
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).
   
 
 0.993
A0A0P9GJZ8
TPR_REGION domain-containing protein.
   
 
 0.991
A0A194S5P2
Uncharacterized protein.
   
 
 0.972
A0A0P9EK45
Uncharacterized protein.
   
 
 0.951
A0A0P9EP09
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
   0.938
A0A194S0U4
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.938
A0A194SD87
MPN domain-containing protein.
   
 
 0.928
A0A194S4I0
Uncharacterized protein.
    
 
 0.917
A0A194SC39
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.471
A0A194SB23
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
    
 
 0.431
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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