STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9EMM2Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (847 aa)    
Predicted Functional Partners:
A0A194S1T5
Uncharacterized protein.
    
 0.944
A0A194S3F8
Robl_LC7 domain-containing protein.
   
 0.920
A0A194S4X0
Arginase; Belongs to the arginase family.
     
 0.903
A0A194S8G8
Uncharacterized protein.
    
 
 0.882
A0A194SCN5
Uncharacterized protein.
    
 
 0.882
A0A194SBR4
Uncharacterized protein.
    
 0.873
A0A194SCD2
Uncharacterized protein.
    
 0.873
A0A0P9H1A5
Uncharacterized protein.
     
 0.840
A0A0P9FAP4
Uncharacterized protein.
   
 
 0.786
A0A194S3N0
Amidase domain-containing protein.
   
 
 0.784
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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