STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9F095Glycoside hydrolase family 5 protein. (864 aa)    
Predicted Functional Partners:
A0A0P9GHC5
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.778
A0A0P9F2I8
FSH1 domain-containing protein.
   
 
 0.717
A0A194S3T3
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.717
A0A194S188
Glycoside hydrolase family 17 protein; Belongs to the glycosyl hydrolase 17 family.
   
 
 0.624
A0A194S2V0
Uncharacterized protein.
    
 0.617
A0A194S563
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.613
A0A194S663
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.609
A0A194SDZ2
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.609
A0A194S8J5
Glycosyltransferase family 48 protein.
    
  0.604
A0A0N8PZP0
Fe2OG dioxygenase domain-containing protein.
    
 0.555
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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