STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9F0U5Malate dehydrogenase. (342 aa)    
Predicted Functional Partners:
A0A0P9ERY0
Aspartate aminotransferase.
   
 0.974
A0A0P9F0X1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.970
A0A194S9E3
Citrate synthase; Belongs to the citrate synthase family.
  
 0.970
A0A194S9H1
Fumarase.
  
 0.966
A0A194S766
Aspartate aminotransferase.
   
 0.964
A0A194SD24
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.952
A0A0P9EH29
Malate synthase; Belongs to the malate synthase family.
   
 0.949
A0A0P9ENV6
Malic enzyme.
  
 0.941
A0A0P9EXB3
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.932
A0A0P9F0V0
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.931
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.