STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9F1L4Uncharacterized protein. (380 aa)    
Predicted Functional Partners:
A0A0P9ITM4
Uncharacterized protein; Belongs to the peptidase C19 family.
    
  0.680
A0A194SBN2
RING-type domain-containing protein.
    
  0.633
A0A194S2F8
AAA domain-containing protein.
    
 0.614
A0A194S6K7
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.614
A0A194SC60
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.614
A0A194S5N5
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.605
A0A194S9F7
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.601
A0A0P9EYR0
Uncharacterized protein.
    
 0.597
A0A194S3C4
Uncharacterized protein.
    
 0.597
A0A194SDE8
Uncharacterized protein.
    
  0.596
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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