STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9GWA4Uncharacterized protein. (672 aa)    
Predicted Functional Partners:
A0A0P9EI21
Autophagy-related protein.
   
 0.998
A0A0P9GH11
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.994
A0A0P9EX42
Autophagy-related protein 3.
  
 
 0.972
A0A194S743
Lipase_3 domain-containing protein.
   
 
 0.969
A0A0P9FDZ8
Autophagy_C domain-containing protein.
    
 0.966
A0A0P9EDY0
UBIQUITIN_CONJUGAT_2 domain-containing protein.
  
 0.963
A0A194S0B0
HECT domain-containing protein.
    
 0.948
A0A0P9IV56
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 0.909
A0A194S2Y2
Uncharacterized protein.
    
 0.903
A0A194S6D8
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
 
  
 0.883
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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