STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9ISC5ABC transporter domain-containing protein. (299 aa)    
Predicted Functional Partners:
A0A0P9ESU0
Uncharacterized protein.
 
      0.636
A0A194S3D9
Uncharacterized protein.
      
 0.441
A0A194SFY1
AAA domain-containing protein.
      
 0.434
A0A194SAN4
WD_REPEATS_REGION domain-containing protein.
 
      0.425
A0A194S2G1
Uncharacterized protein.
      
0.424
A0A194S3Z8
Uncharacterized protein.
      
 0.412
A0A194S9N7
VHS domain-containing protein.
   
    0.407
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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