STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9ISE4Uncharacterized protein. (562 aa)    
Predicted Functional Partners:
A0A194S4R9
PIPK domain-containing protein.
    
 
 0.909
A0A194S3P1
GRIP domain-containing protein.
    
 0.889
A0A194S4L8
Guanylate kinase-like domain-containing protein.
    
 0.877
A0A0P9GK57
Uncharacterized protein.
   
 0.764
A0A0P9GZD6
Uncharacterized protein.
   
 0.764
A0A194S1U2
Uncharacterized protein.
   
 0.764
A0A194S250
Uncharacterized protein.
   
 0.764
A0A194S470
Glycoside hydrolase family 20 protein.
   
 0.764
A0A194S868
Uncharacterized protein.
   
 0.764
A0A194SAL5
Uncharacterized protein.
   
 0.764
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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