STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P9ITY8Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
A0A194S9T5
PALP domain-containing protein.
  
 0.929
A0A0P9GG50
PALP domain-containing protein.
  
 0.918
A0A0P9EL42
Uncharacterized protein.
  
 
 0.908
A0A194S411
Uncharacterized protein.
   
 
 0.883
A0A0N8Q025
Adenosylhomocysteinase.
  
 0.866
A0A0P9EZ45
Uncharacterized protein.
  
  
0.864
A0A194S0A5
Tryptophan synthase.
  
 
 0.858
A0A194SBY7
AB hydrolase-1 domain-containing protein.
   
 
 0.832
A0A194S4P2
Uncharacterized protein.
  
 
 0.824
A0A194S1C4
GHMP_kinases_N domain-containing protein.
  
 
 0.823
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.