STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S453ELYS domain-containing protein. (741 aa)    
Predicted Functional Partners:
A0A194S126
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.988
A0A194S548
Uncharacterized protein.
   
 0.986
A0A194SDA2
Uncharacterized protein.
   
 0.978
A0A194SFV9
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.977
A0A0P9EK24
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.976
A0A194S9P8
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.974
A0A0P9EW69
Uncharacterized protein.
   
 0.972
A0A0P9EW54
Nuclear pore protein.
    
 0.970
A0A194SDM5
Uncharacterized protein.
   
 0.969
A0A194S4U0
Peptidase S59 domain-containing protein.
   
 0.959
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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