STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S4S5Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (417 aa)    
Predicted Functional Partners:
A0A194S3U8
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 0.990
A0A0N8PZR2
Uncharacterized protein.
 
 0.986
A0A194SAI4
Uncharacterized protein.
  
 0.964
A0A0N8PZH2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.954
A0A0P9H1H5
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.954
A0A194SBN0
Uncharacterized protein.
  
 0.948
A0A194S7C1
Aldedh domain-containing protein.
   
 0.940
A0A194S3F6
WD_REPEATS_REGION domain-containing protein.
    
 0.934
A0A194S6N4
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.931
A0A194S5M4
Uncharacterized protein.
   
 0.929
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.