STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S5A9Iso_dh domain-containing protein. (366 aa)    
Predicted Functional Partners:
A0A194S8S5
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
 0.958
A0A194S9E1
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.950
A0A194S2Y3
Pyruvate carboxyltransferase domain-containing protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.850
A0A194S2X8
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 0.830
A0A0P9ISL1
ACT domain-containing protein.
  
 0.809
A0A194SG38
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
   
  
 0.808
A0A0P9ENI0
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.772
A0A194S989
Pyruvate carboxyltransferase domain-containing protein.
  
 0.756
A0A0N8PZH1
Aminotran_1_2 domain-containing protein.
  
 
 0.755
A0A194S6N4
Pyruvate carboxyltransferase domain-containing protein.
  
 0.745
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.