STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S5C5Glycosyltransferase family 21 protein. (480 aa)    
Predicted Functional Partners:
A0A194S0A5
Tryptophan synthase.
  
 0.965
A0A194SCQ9
Glutamine amidotransferase type-1 domain-containing protein.
  
 0.963
A0A0P9EIP5
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.952
A0A194S6S7
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.946
A0A0P9EIS2
Metallophos domain-containing protein.
     
 0.846
A0A0P9FEA1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family.
     
 0.846
A0A0P9ISL1
ACT domain-containing protein.
  
 
 0.834
A0A0P9GHE1
Uncharacterized protein.
  
 
 0.801
A0A194S5Y9
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 0.774
A0A194SEB2
acidPPc domain-containing protein.
    
 0.759
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.