STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S5L4HMA domain-containing protein. (73 aa)    
Predicted Functional Partners:
A0A194S5P1
Uncharacterized protein.
    
 0.986
A0A194S638
Uncharacterized protein.
   
   0.857
A0A0N8PZZ2
Uncharacterized protein.
   
 
 0.786
A0A194SCJ3
Uncharacterized protein.
   
 
 0.786
A0A194SC21
Uncharacterized protein.
    
 
 0.739
A0A194S0U0
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
   0.687
A0A194S6E6
Glycosyltransferase family 90 protein.
   
 
 0.640
A0A194SD61
Uncharacterized protein.
    
   0.638
A0A194S662
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.637
A0A194S5B2
Uncharacterized protein.
   
 
 0.631
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.