STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S5Y9Uncharacterized protein; Belongs to the TPP enzyme family. (484 aa)    
Predicted Functional Partners:
A0A0P9ISL1
ACT domain-containing protein.
 
 0.999
A0A0P9EIW5
Uncharacterized protein.
 
 0.990
A0A194S147
Uncharacterized protein; Belongs to the ketol-acid reductoisomerase family.
  
 
 0.978
A0A194SBI9
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.971
A0A194S989
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.951
A0A194S2X8
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.938
A0A0P9ENV6
Malic enzyme.
  
 
 0.930
A0A194SD24
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.930
A0A0P9EK17
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.928
A0A194S792
L-mandelate dehydrogenase.
    
 0.927
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.