STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S613Uncharacterized protein. (569 aa)    
Predicted Functional Partners:
A0A194SB52
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.766
A0A0P9EMJ1
Telo_bind domain-containing protein.
    
  0.682
A0A0P9EES1
WD_REPEATS_REGION domain-containing protein.
    
 0.677
A0A194S6V8
Uncharacterized protein.
    
 0.674
A0A194S865
Uncharacterized protein.
    
 0.674
A0A194SBG2
Uncharacterized protein.
    
 0.674
A0A194SBI5
Uncharacterized protein.
    
 0.674
A0A194SAW8
Uncharacterized protein.
    
 0.651
A0A194S4M6
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.645
A0A194S5X0
TAF domain-containing protein.
    
 0.598
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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