STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S6C4AB hydrolase-1 domain-containing protein. (287 aa)    
Predicted Functional Partners:
A0A194S0A5
Tryptophan synthase.
    
 0.796
A0A194SCQ9
Glutamine amidotransferase type-1 domain-containing protein.
   
 0.724
A0A0P9IRV8
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.717
A0A0N8PZY4
Uncharacterized protein.
    
 0.713
A0A194S3R3
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.641
A0A0P9FAU4
Uncharacterized protein.
    
 0.640
A0A194SFL3
Uncharacterized protein.
    
 0.640
A0A0P9FAP4
Uncharacterized protein.
  
 
 0.616
A0A194S3N0
Amidase domain-containing protein.
  
 
 0.616
A0A0P9EIX2
SH3 domain-containing protein.
    
  0.606
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.