STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S8U9Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
A0A194S856
Uncharacterized protein.
   
 0.990
A0A194S6P3
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
 0.987
A0A0P9EP79
CIA30 domain-containing protein.
    
 0.986
A0A194S8E5
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.986
A0A194S9Q3
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.986
A0A0P9EWY8
Uncharacterized protein.
   
 0.981
A0A194SBI8
Methyltransf_11 domain-containing protein.
    
 0.981
A0A194S8B6
Uncharacterized protein.
   
 0.967
A0A194SC06
Uncharacterized protein.
   
 0.967
A0A194S1E2
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
 0.954
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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