STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194S9Q1GMC_OxRdtase_N domain-containing protein. (728 aa)    
Predicted Functional Partners:
A0A194S5L8
Uncharacterized protein.
    
 0.733
A0A0P9EKC5
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.725
A0A0P9F285
Fungal_trans domain-containing protein.
    
 0.690
A0A0P9GI50
Uncharacterized protein.
    
 0.690
A0A194SA58
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.690
A0A0N8PZF2
BUD22 domain-containing protein.
    
 0.656
A0A0P9EES1
WD_REPEATS_REGION domain-containing protein.
    
 0.640
A0A0P9EYK2
Uncharacterized protein.
    
 0.640
A0A0P9F289
WD_REPEATS_REGION domain-containing protein.
    
 0.640
A0A194S4A0
Uncharacterized protein.
    
 0.640
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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