STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194SAR8Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
A0A194SAD7
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.968
A0A194S837
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.965
A0A194S3Z4
Uncharacterized protein.
  
 0.865
A0A0P9H1P4
MTS domain-containing protein.
   
 
 0.783
A0A0P9IPZ4
Methyltranfer_dom domain-containing protein.
   
 
 0.783
A0A0P9GKE0
Uncharacterized protein.
  
  
 0.671
A0A194SCL9
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.656
A0A194SB26
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.652
A0A0P9ERU8
HEM4 domain-containing protein.
     
 0.624
A0A194S5A4
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.624
Your Current Organism:
Rhodotorula graminis
NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1
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