NCER_100663 protein (Nosema ceranae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NCER_100663

UTP--glucose-1-phosphate uridylyltransferase. (478 aa)

Predicted Functional Partners:

NCER_100278

0.957

NCER_100272

0.818

NCER_100956

0.720

NCER_100660

0.648

NCER_100921

0.637

NCER_100915

0.577

NCER_101404

0.577

NCER_101108

0.573

NCER_102204

0.563

NCER_100018

0.509

Your Current Organism:

Nosema ceranae

NCBI taxonomy Id: 578460
Other names: N. ceranae BRL01, Nosema ceranae BRL01

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCER_100018	NCER_100663	C4V6I8	C4V858	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.	UTP--glucose-1-phosphate uridylyltransferase.	0.509
NCER_100272	NCER_100660	C4V755	C4V855	Uncharacterized protein.	NTP_transferase domain-containing protein.	0.849
NCER_100272	NCER_100663	C4V755	C4V858	Uncharacterized protein.	UTP--glucose-1-phosphate uridylyltransferase.	0.818
NCER_100272	NCER_100915	C4V755	C4V8S5	Uncharacterized protein.	Uncharacterized protein.	0.763
NCER_100272	NCER_100921	C4V755	C4V8S9	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.967
NCER_100272	NCER_100956	C4V755	C4V8V6	Uncharacterized protein.	NTP_transf_3 domain-containing protein.	0.970
NCER_100272	NCER_101108	C4V755	C4V992	Uncharacterized protein.	Phosphotransferase.	0.827
NCER_100272	NCER_101404	C4V755	C4V9Y1	Uncharacterized protein.	Glyco_trans_4-like_N domain-containing protein.	0.763
NCER_100272	NCER_102204	C4V755	C4VBM0	Uncharacterized protein.	Uncharacterized protein.	0.734
NCER_100278	NCER_100663	C4V761	C4V858	Glyco_transf_20 domain-containing protein.	UTP--glucose-1-phosphate uridylyltransferase.	0.957
NCER_100278	NCER_100921	C4V761	C4V8S9	Glyco_transf_20 domain-containing protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.622
NCER_100278	NCER_101108	C4V761	C4V992	Glyco_transf_20 domain-containing protein.	Phosphotransferase.	0.508
NCER_100660	NCER_100272	C4V855	C4V755	NTP_transferase domain-containing protein.	Uncharacterized protein.	0.849
NCER_100660	NCER_100663	C4V855	C4V858	NTP_transferase domain-containing protein.	UTP--glucose-1-phosphate uridylyltransferase.	0.648
NCER_100660	NCER_100915	C4V855	C4V8S5	NTP_transferase domain-containing protein.	Uncharacterized protein.	0.726
NCER_100660	NCER_100921	C4V855	C4V8S9	NTP_transferase domain-containing protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.752
NCER_100660	NCER_100956	C4V855	C4V8V6	NTP_transferase domain-containing protein.	NTP_transf_3 domain-containing protein.	0.421
NCER_100660	NCER_101404	C4V855	C4V9Y1	NTP_transferase domain-containing protein.	Glyco_trans_4-like_N domain-containing protein.	0.726
NCER_100660	NCER_102204	C4V855	C4VBM0	NTP_transferase domain-containing protein.	Uncharacterized protein.	0.848
NCER_100663	NCER_100018	C4V858	C4V6I8	UTP--glucose-1-phosphate uridylyltransferase.	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.	0.509