STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCER_100851Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
NCER_102477
Uncharacterized protein.
   
 0.967
SPO11
Probable meiosis-specific protein SPO11 homolog; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (By similarity).
     
 0.728
NCER_100038
Probable phenylalanine--tRNA ligase alpha subunit.
   
  
 0.602
NCER_100217
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.571
NCER_100753
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.537
NCER_101258
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
  
 0.533
NCER_100158
Probable tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.481
NCER_101431
tRNA-binding domain-containing protein.
  
  
 0.481
NCER_101716
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.426
NCER_100520
Ribosomal_L6 domain-containing protein.
   
   0.406
Your Current Organism:
Nosema ceranae
NCBI taxonomy Id: 578460
Other names: N. ceranae BRL01, Nosema ceranae BRL01
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