STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCER_101113TRUD domain-containing protein. (473 aa)    
Predicted Functional Partners:
NCER_101809
PseudoU_synth_1 domain-containing protein.
   
 
 0.785
NCER_100100
tRNA pseudouridine synthase.
   
 
 0.778
NCER_100126
DKCLD domain-containing protein.
   
  
 0.776
NCER_100699
G domain-containing protein.
   
   0.773
NCER_101471
Uncharacterized protein.
   
  
 0.716
NCER_101066
NOC3p domain-containing protein.
   
   0.711
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.693
NCER_101927
Uncharacterized protein.
   
    0.690
NCER_101780
Uncharacterized protein.
  
 
 0.656
NCER_100645
Protein MAK16; Belongs to the MAK16 family.
   
  
 0.653
Your Current Organism:
Nosema ceranae
NCBI taxonomy Id: 578460
Other names: N. ceranae BRL01, Nosema ceranae BRL01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.