STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCER_101536Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
SSL2
General transcription and DNA repair factor IIH helicase subunit XPB; ATP-dependent 3'-5' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATPase activity of XPB/SSL2, but not its helicase activity, is required f [...]
   
 0.925
NCER_101303
Helicase ATP-binding domain-containing protein.
   
 0.923
NCER_100721
Uncharacterized protein.
   
 0.909
NCER_100127
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.882
NCER_100752
ERCC4 domain-containing protein.
   
 0.853
NCER_101359
Uncharacterized protein.
   
 0.848
NCER_100319
Uncharacterized protein.
  
 0.840
NCER_100709
Uncharacterized protein.
   
 0.828
NCER_100571
Uncharacterized protein.
   
 
 0.813
NCER_100158
Probable tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.806
Your Current Organism:
Nosema ceranae
NCBI taxonomy Id: 578460
Other names: N. ceranae BRL01, Nosema ceranae BRL01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.