STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NC2BNegative cofactor 2 complex subunit beta. (145 aa)    
Predicted Functional Partners:
MOT1
Helicase mot1.
    
 
 0.885
TBP
TATA-box-binding protein.
    
 
 0.864
TBP-2
TATA-box-binding protein.
    
 
 0.864
NBO_905gi001
Class 2 transcriptional repressor.
   
 
 0.852
NBO_3gi001
Class 2 transcriptional repressor.
   
 
 0.852
NBO_52gi001
Class 2 transcriptional repressor.
   
 
 0.852
GCN5
Histone acetyltransferase gcn5.
    
 0.751
AF9
Protein AF-9.
    
 0.615
AF9-2
Protein AF-9.
    
 0.615
TF2B
Transcription initiation factor IIB.
    
 
 0.565
Your Current Organism:
Nosema bombycis
NCBI taxonomy Id: 578461
Other names: N. bombycis CQ1, Nosema bombycis CQ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.