STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_01075Methionyl-tRNA formyltransferase. (405 aa)    
Predicted Functional Partners:
AMAG_05016
Thymidylate synthase.
  
 
 0.950
AMAG_03890
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.938
AMAG_07055
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.938
AMAG_01483
Uncharacterized protein.
  
 
 0.936
AMAG_03976
Uncharacterized protein.
  
 
 0.936
AMAG_12740
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.901
AMAG_07848
tRNA-binding domain-containing protein.
     
 0.887
AMAG_09643
tRNA-binding domain-containing protein.
     
 0.887
AMAG_05773
Uncharacterized protein.
    
 0.870
AMAG_12258
Uncharacterized protein.
    
 0.870
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.