STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_00869WD_REPEATS_REGION domain-containing protein. (1011 aa)    
Predicted Functional Partners:
AMAG_14768
USP domain-containing protein.
    
 0.993
AMAG_15233
Ubiquitin carboxyl-terminal hydrolase.
    
 0.993
AMAG_01350
WD_REPEATS_REGION domain-containing protein.
  
 
 0.986
AMAG_18473
WD_REPEATS_REGION domain-containing protein.
  
 
 0.986
AMAG_13645
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.976
AMAG_01331
Uncharacterized protein.
    
 0.960
AMAG_18472
Uncharacterized protein.
    
 0.960
AMAG_18471
Uncharacterized protein.
    
 0.960
AMAG_03780
Ubiquitin-40S ribosomal protein S27a.
    
  0.917
AMAG_11168
Ubiquitin-60S ribosomal protein L40.
    
  0.917
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.