STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_00978Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
AMAG_12915
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.985
AMAG_15585
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.982
AMAG_06154
Uncharacterized protein.
  
 0.980
AMAG_02852
60S ribosomal protein L32.
  
 0.978
AMAG_08547
Uncharacterized protein.
   
 0.977
AMAG_10832
Uncharacterized protein.
   
 0.977
AMAG_12594
60S ribosomal protein.
   
 0.975
AMAG_08565
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.973
AMAG_14014
Ribosomal protein L19.
   
 0.973
AMAG_07808
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.970
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.