AMAG_17762 protein (Allomyces macrogynus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMAG_17762

ANK_REP_REGION domain-containing protein. (967 aa)

Predicted Functional Partners:

AMAG_10999

0.892

AMAG_11601

0.892

AMAG_10598

0.776

AMAG_14666

0.743

AMAG_05745

0.739

AMAG_12288

0.739

AMAG_12318

0.739

AMAG_02996

0.731

AMAG_07821

0.727

AMAG_09673

0.727

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_02996	AMAG_14666	A0A0L0S3Y6	A0A0L0T7L9	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.822
AMAG_02996	AMAG_17762	A0A0L0S3Y6	A0A0L0RYL8	IFT81_CH domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.731
AMAG_05745	AMAG_07821	A0A0L0SCS7	A0A0L0SJP5	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.758
AMAG_05745	AMAG_09673	A0A0L0SCS7	A0A0L0STP5	Uncharacterized protein.	DUF4210 domain-containing protein.	0.758
AMAG_05745	AMAG_14666	A0A0L0SCS7	A0A0L0T7L9	Uncharacterized protein.	Uncharacterized protein.	0.821
AMAG_05745	AMAG_17762	A0A0L0SCS7	A0A0L0RYL8	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.739
AMAG_07821	AMAG_05745	A0A0L0SJP5	A0A0L0SCS7	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.758
AMAG_07821	AMAG_09673	A0A0L0SJP5	A0A0L0STP5	Guanylate kinase-like domain-containing protein.	DUF4210 domain-containing protein.	0.876
AMAG_07821	AMAG_12288	A0A0L0SJP5	A0A0L0SXI2	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.758
AMAG_07821	AMAG_12318	A0A0L0SJP5	A0A0L0SY38	Guanylate kinase-like domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.758
AMAG_07821	AMAG_14666	A0A0L0SJP5	A0A0L0T7L9	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.790
AMAG_07821	AMAG_17762	A0A0L0SJP5	A0A0L0RYL8	Guanylate kinase-like domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.727
AMAG_09673	AMAG_05745	A0A0L0STP5	A0A0L0SCS7	DUF4210 domain-containing protein.	Uncharacterized protein.	0.758
AMAG_09673	AMAG_07821	A0A0L0STP5	A0A0L0SJP5	DUF4210 domain-containing protein.	Guanylate kinase-like domain-containing protein.	0.876
AMAG_09673	AMAG_12288	A0A0L0STP5	A0A0L0SXI2	DUF4210 domain-containing protein.	Uncharacterized protein.	0.758
AMAG_09673	AMAG_12318	A0A0L0STP5	A0A0L0SY38	DUF4210 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.758
AMAG_09673	AMAG_14666	A0A0L0STP5	A0A0L0T7L9	DUF4210 domain-containing protein.	Uncharacterized protein.	0.790
AMAG_09673	AMAG_17762	A0A0L0STP5	A0A0L0RYL8	DUF4210 domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.727
AMAG_10598	AMAG_14666	A0A0L0SRE9	A0A0L0T7L9	Lysophospholipase.	Uncharacterized protein.	0.886
AMAG_10598	AMAG_17762	A0A0L0SRE9	A0A0L0RYL8	Lysophospholipase.	ANK_REP_REGION domain-containing protein.	0.776