STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_01413Dihydroorotase, homodimeric type. (377 aa)    
Predicted Functional Partners:
AMAG_16470
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.946
AMAG_20557
DHO_dh domain-containing protein.
  
 
 0.946
AMAG_11440
Carbamoyl-phosphate synthase, large subunit.
   
 
 0.851
AMAG_13899
Carbamoyl-phosphate synthase, large subunit.
   
 
 0.851
AMAG_10900
Amidohydro-rel domain-containing protein.
    
 0.824
AMAG_18546
CPSase_sm_chain domain-containing protein.
   
 
 0.770
AMAG_18545
Carbamoyl-phosphate synthase, small subunit.
   
 
 0.770
AMAG_07506
Carbamoyl-phosphate synthase, large subunit.
   
 
 0.770
AMAG_08399
Carbamoyl-phosphate synthase, large subunit.
   
 
 0.770
AMAG_09525
Carbamoyl-phosphate synthase, small subunit.
   
 
 0.770
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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