STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_01451Uncharacterized protein. (574 aa)    
Predicted Functional Partners:
AMAG_10294
UmuC domain-containing protein.
    
 0.946
AMAG_03780
Ubiquitin-40S ribosomal protein S27a.
    
  0.741
AMAG_11168
Ubiquitin-60S ribosomal protein L40.
    
  0.741
AMAG_00080
Ubiquitin-like domain-containing protein.
    
  0.677
AMAG_03014
UmuC domain-containing protein.
    
 0.672
AMAG_05844
UmuC domain-containing protein.
    
 0.672
AMAG_04940
AAA domain-containing protein.
   
 
  0.626
AMAG_03620
AAA domain-containing protein.
   
 
  0.626
AMAG_01798
BRCT domain-containing protein.
    
 0.614
AMAG_06241
UmuC domain-containing protein.
    
 0.614
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.