AMAG_17805 protein (Allomyces macrogynus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMAG_17805

Uncharacterized protein. (325 aa)

Predicted Functional Partners:

AMAG_17804

0.951

AMAG_17803

0.950

AMAG_17806

0.948

AMAG_17984

0.941

AMAG_17813

0.940

AMAG_04134

0.930

AMAG_18251

0.923

AMAG_17820

0.900

AMAG_12401

0.842

AMAG_04540

0.840

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_04134	AMAG_04540	A0A0L0S828	A0A0L0S5E6	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_04134	AMAG_12401	A0A0L0S828	A0A0L0SZ31	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.842
AMAG_04134	AMAG_17805	A0A0L0S828	A0A0L0S005	Uncharacterized protein.	Uncharacterized protein.	0.930
AMAG_04540	AMAG_04134	A0A0L0S5E6	A0A0L0S828	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_04540	AMAG_12401	A0A0L0S5E6	A0A0L0SZ31	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.966
AMAG_04540	AMAG_17803	A0A0L0S5E6	A0A0L0S041	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_04540	AMAG_17804	A0A0L0S5E6	A0A0L0RZX1	Uncharacterized protein.	AAA_6 domain-containing protein.	0.840
AMAG_04540	AMAG_17805	A0A0L0S5E6	A0A0L0S005	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_04540	AMAG_17806	A0A0L0S5E6	A0A0L0RZ52	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_04540	AMAG_17813	A0A0L0S5E6	A0A0L0RZ69	Uncharacterized protein.	Uncharacterized protein.	0.818
AMAG_04540	AMAG_17820	A0A0L0S5E6	A0A0L0S025	Uncharacterized protein.	Dynein_C domain-containing protein.	0.840
AMAG_04540	AMAG_17984	A0A0L0S5E6	A0A0L0S364	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_04540	AMAG_18251	A0A0L0S5E6	A0A0L0S7A5	Uncharacterized protein.	Uncharacterized protein.	0.840
AMAG_12401	AMAG_04134	A0A0L0SZ31	A0A0L0S828	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.842
AMAG_12401	AMAG_04540	A0A0L0SZ31	A0A0L0S5E6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.966
AMAG_12401	AMAG_17803	A0A0L0SZ31	A0A0L0S041	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.842
AMAG_12401	AMAG_17804	A0A0L0SZ31	A0A0L0RZX1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	AAA_6 domain-containing protein.	0.842
AMAG_12401	AMAG_17805	A0A0L0SZ31	A0A0L0S005	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.842
AMAG_12401	AMAG_17806	A0A0L0SZ31	A0A0L0RZ52	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.842
AMAG_12401	AMAG_17813	A0A0L0SZ31	A0A0L0RZ69	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.821